Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TIPARPTCDD inducible poly(ADP-ribose) polymerase. (701 aa)    
Predicted Functional Partners:
ENSPMEP00000028978
Uncharacterized protein.
    
 
 0.466
LOC106911697
Kruppel-like factor 6a.
    
 
 0.433
LOC106923866
Uncharacterized protein.
    
 
 0.433
LOC106920957
Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
     
 0.418
mrpl24
Mitochondrial ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
   
   0.415
ahrr
Uncharacterized protein.
      
 0.413
pbk
PDZ binding kinase.
      
 0.413
trip12
Thyroid hormone receptor interactor 12.
    
 
 0.409
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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