Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001558Uncharacterized protein. (209 aa)    
Predicted Functional Partners:
nup153
Nucleoporin 153.
   
 0.874
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.857
nxf1
Zgc:153681.
    
 0.827
rae1
Ribonucleic acid export 1.
    
 0.820
nup133
Nucleoporin 133.
   
 0.808
nup85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.800
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
    
 0.786
ENSPMEP00000021659
Uncharacterized protein.
   
 0.783
ENSPMEP00000021661
Uncharacterized protein.
   
 0.783
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.781
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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