Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mysm1Myb-like, SWIRM and MPN domains 1. (837 aa)    
Predicted Functional Partners:
kat2b
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.997
kat2a
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.997
cecr2
Bromo domain-containing protein.
    
 0.997
rps27a
Ribosomal protein S27a.
   
 0.992
psmd7
Proteasome 26S subunit, non-ATPase 7.
   
 0.990
psmc1
Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.
   
 0.989
psmd6
Proteasome 26S subunit, non-ATPase 6.
   
 0.988
psmc3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
  
 0.986
psmd13
Proteasome 26S subunit, non-ATPase 13.
   
 0.986
psmb2
Proteasome subunit beta.
   
 0.985
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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