STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ciitaNACHT domain-containing protein. (1648 aa)    
Predicted Functional Partners:
rfx5
Regulatory factor X, 5.
    
 0.933
rfxank
Regulatory factor X-associated ankyrin-containing protein.
   
 0.898
rfxap
Regulatory factor X-associated protein.
     
 0.862
nfya
Nuclear transcription factor Y, alpha, like.
     
 0.747
nfyc
Nuclear transcription factor Y, gamma.
     
 0.746
ENSPMEP00000017731
CBFD_NFYB_HMF domain-containing protein.
     
 0.680
NFYB
Nuclear transcription factor Y, beta a.
     
 0.680
LOC106931704
Activating transcription factor 1.
   
 
 0.601
LOC106933037
cAMP responsive element binding protein 1.
   
 
 0.561
LOC106930896
BZIP domain-containing protein.
   
 
 0.561
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.