STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dexiDexi homolog (mouse). (89 aa)    
Predicted Functional Partners:
clec16a
C-type lectin domain containing 16A.
      
 0.548
rfxap
Regulatory factor X-associated protein.
   
  
 0.528
mrpl45
Mitochondrial ribosomal protein L45.
      
 0.527
ENSPMEP00000022910
MAP6 domain containing 1.
      
 0.527
ENSPMEP00000019310
Mitochondrial ribosomal protein S28.
      
 0.522
ENSPMEP00000033048
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
      
 0.519
kctd2
Potassium channel tetramerization domain containing 2.
   
    0.514
manba
Mannosidase, beta A, lysosomal.
      
 0.509
LOC106914971
Signal transducer and activator of transcription.
      
 0.499
LOC106907615
WAS/WASL interacting protein family, member 2b.
      
 0.499
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.