Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106908969Uncharacterized protein. (476 aa)    
Predicted Functional Partners:
rab21
RAB21, member RAS oncogene family.
    
 0.815
mtm1
Myotubularin 1.
    
 0.807
mtmr2
Myotubularin related protein 2.
    
 0.807
LOC106917253
Myotubularin related protein 1a.
    
 0.807
MTMR4
Myotubularin related protein 4.
    
 0.712
mtmr3
Myotubularin related protein 3.
    
 0.712
sh3tc2
SH3 domain and tetratricopeptide repeats 2.
      
 0.664
tcf20
Transcription factor 20.
    
 
 0.636
rai1
Retinoic acid induced 1.
    
 
 0.636
LOC106919951
Lysine (K)-specific methyltransferase 2Ba.
   
 
 0.622
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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