STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssu72SSU72 homolog, RNA polymerase II CTD phosphatase. (194 aa)    
Predicted Functional Partners:
WDR33
WD repeat domain 33.
    
 0.994
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.994
cpsf4
Cleavage and polyadenylation specific factor 4.
   
 0.994
LOC106918697
FIP1 like 1b (S. cerevisiae).
    
 0.993
twf2
WD repeat domain 82.
   
 0.989
LOC106918066-2
WD_REPEATS_REGION domain-containing protein.
   
 0.985
ENSPMEP00000016800
CPSF_A domain-containing protein.
    
 0.984
ENSPMEP00000032006
Uncharacterized protein.
    
 0.984
cpsf3
Cleavage and polyadenylation specific factor 3.
   
 0.979
polr2a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.973
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.