Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATAD3AATPase family AAA domain containing 3A. (674 aa)    
Predicted Functional Partners:
ecsit
ECSIT signalling integrator.
   
   0.902
phb
Prohibitin.
   
 
 0.893
ndufaf1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
    
   0.873
LOC106908129
Prohibitin.
   
 
 0.807
LOC106921412
Prohibitin.
   
 
 0.807
cct3
T-complex protein 1 subunit gamma.
   
 
 0.771
rpl21
Ribosomal protein L21.
    
   0.762
fam210a
Family with sequence similarity 210 member Ab.
    
 
 0.739
hspd1
Heat shock 60 protein 1; Belongs to the chaperonin (HSP60) family.
   
 
 0.722
abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
    
 
 0.719
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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