STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATAD3AATPase family AAA domain containing 3A. (674 aa)    
Predicted Functional Partners:
ecsit
ECSIT signalling integrator.
   
   0.860
ndufaf1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
    
   0.838
phb
Prohibitin.
   
 
 0.686
LOC106908129
Prohibitin.
   
 
 0.610
LOC106921412
Prohibitin.
   
 
 0.610
LOC106914922
Translocator protein.
      
 0.602
LOC106914926
Translocator protein.
      
 0.602
fam210a
Family with sequence similarity 210 member Ab.
    
 
 0.600
star
Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.
      
 0.586
synj2bp
Synaptojanin 2 binding protein.
   
 
 0.585
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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