Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106905389Mitochondrial ribosomal protein L27. (152 aa)    
Predicted Functional Partners:
ENSPMEP00000014065
Mitochondrial ribosomal protein L21.
  
 
 0.985
mrpl19
Mitochondrial ribosomal protein L19.
  
 
 0.985
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.984
mrpl9
Mitochondrial ribosomal protein L9.
  
 
 0.983
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.983
mrpl32
Mitochondrial ribosomal protein L32.
  
 
 0.982
mrpl13
Mitochondrial ribosomal protein L13.
  
 
 0.979
mrpl33
Mitochondrial ribosomal protein L33.
  
 
 0.978
mrpl4
Mitochondrial ribosomal protein L4.
  
 
 0.976
mrpl12
Mitochondrial ribosomal protein L12.
  
 
 0.974
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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