Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zc3h12bZinc finger CCCH-type containing 12B. (826 aa)    
Predicted Functional Partners:
sarnp
SAP domain containing ribonucleoprotein.
   
  
 0.728
thoc3
THO complex 3.
      
 0.698
zc3h4
Zinc finger CCCH-type containing 4.
      
 0.682
ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
  0.606
LOC106932346
HTH La-type RNA-binding domain-containing protein.
      
 0.564
LARP4B
La ribonucleoprotein domain family member 4B.
      
 0.564
larp4
La ribonucleoprotein domain family, member 4Aa.
      
 0.564
optn
Optineurin.
    
  0.550
LOC106922717
Si:ch73-252i11.1.
    
 
 0.526
tank
TRAF family member-associated NFKB activator.
   
 
 0.524
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.