Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106914454Biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino. (245 aa)    
Predicted Functional Partners:
bloc1s6
Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.
   
 0.998
bloc1s1
Biogenesis of lysosomal organelles complex-1, subunit 1.
    
 0.997
dtnbp1
Dystrobrevin binding protein 1b.
   
 0.995
bloc1s5
Biogenesis of lysosomal organelles complex-1, subunit 5, muted.
    
 0.986
bloc1s3
Biogenesis of lysosome-related organelles complex 1 subunit 3; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO). Belongs to the BLOC1S3 family.
    
 0.976
snapin
SNAP associated protein.
    
 0.969
washc3
WASH complex subunit 3.
    
   0.948
bloc1s2
Biogenesis of lysosomal organelles complex-1, subunit 2.
   
 0.943
hps6
Uncharacterized protein.
     
 0.881
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
    
   0.826
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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