Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106922083Sorting nexin 13. (916 aa)    
Predicted Functional Partners:
SNX14
Sorting nexin 14.
   
 
 0.785
LOC106906139
Sorting nexin 14.
   
 
 0.785
LOC106925576
Tetraspanin.
    
   0.758
LOC106920989
Tetraspanin.
    
   0.758
tspan13
Tetraspanin 13a; Belongs to the tetraspanin (TM4SF) family.
    
 
 0.721
ankmy2
Ankyrin repeat and MYND domain containing 2a.
    
 
 0.683
LOC106933065
Family with sequence similarity 113.
      
 0.668
CAAP1
Caspase activity and apoptosis inhibitor 1.
      
 0.631
ankrd46
Ankyrin repeat domain 46b.
    
 0.597
atp13a1
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
      
 0.593
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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