Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001640Ig-like domain-containing protein. (114 aa)    
Predicted Functional Partners:
ENSPMEP00000026301
Ig-like domain-containing protein.
  
  
  0.508
ENSPMEP00000026324
Ig-like domain-containing protein.
  
  
  0.471
cd3e
Ig_4 domain-containing protein.
   
 
  0.457
LOC106914150
Ig_4 domain-containing protein.
   
 
  0.457
LOC106914158
Uncharacterized protein.
     
  0.424
ENSPMEP00000006815
Ig-like domain-containing protein.
  
  0.402
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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