Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
croccUncharacterized protein. (1670 aa)    
Predicted Functional Partners:
nek2
NIMA-related kinase 2.
    
 0.879
atp5if1
Uncharacterized protein.
    
   0.847
cep135
Centrosomal protein 135.
   
 0.817
cep78
Centrosomal protein 78.
    
 0.812
LOC106924837
Centrin 4.
   
 0.800
cetn2
Centrin, EF-hand protein, 2.
   
 0.732
plk2
Serine/threonine-protein kinase PLK.
    
 0.710
plk3
Serine/threonine-protein kinase PLK.
    
 0.710
PLK1
Serine/threonine-protein kinase PLK.
    
 0.710
plk4
Polo-like kinase 4 (Drosophila).
    
 0.685
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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