STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106911461L-threonine dehydrogenase 2. (367 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.945
LOC106927483
Threonine aldolase 1.
    
 0.921
LOC106909290
PALP domain-containing protein.
  
 
 0.916
EPRS1
Glutamyl-prolyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  0.911
LOC106904088
Glutamyl-prolyl-tRNA synthetase.
  
  0.911
SDS
Serine dehydratase.
  
 
 0.910
sdsl
Serine dehydratase-like.
  
 
 0.910
gcat
Glycine C-acetyltransferase.
  
 
 0.908
LOC106927643
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial-like.
  
 
 0.908
LOC106923258
L-threonine dehydrogenase.
  
  
 
0.900
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.