Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106932293Uncharacterized protein. (714 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
  0.487
vps26a
VPS26, retromer complex component A.
      
 0.481
alg6
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
      
 0.473
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.455
ddx51
DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family.
    
 0.438
LOC106926452
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
  0.435
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
  0.435
snrpd2
Small nuclear ribonucleoprotein Sm D2.
    
 0.427
ENSPMEP00000002318
Small nuclear ribonucleoprotein polypeptide F.
    
  0.426
snrpd3
Small nuclear ribonucleoprotein Sm D3.
    
 0.426
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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