STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106911460Zgc:154055. (548 aa)    
Predicted Functional Partners:
mtmr6
Myotubularin related protein 6.
  
0.874
LOC106905811
Myotubularin related protein 7b.
  
0.872
mtmr7
Myotubularin related protein 7a.
  
0.871
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.659
LOC106917253
Myotubularin related protein 1a.
  
 
0.630
mtm1
Myotubularin 1.
  
 
0.626
mtmr2
Myotubularin related protein 2.
  
 
0.625
pikfyve
Phosphoinositide kinase, FYVE finger containing.
     
 0.624
MTMR4
Myotubularin related protein 4.
   
0.609
mtmr3
Myotubularin related protein 3.
   
0.609
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.