STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrc2Mannose receptor, C type 2. (1471 aa)    
Predicted Functional Partners:
LOC106916566
Si:dkey-26c10.5.
    
 0.758
ttc8
Tetratricopeptide repeat domain 8.
    
 
 0.622
LOC106929449
Matrix metallopeptidase 19.
    
 0.619
ANGPTL2
Angiopoietin like 2.
    
 0.612
LOC106905308
Aldehyde dehydrogenase 6 family member A1.
      
 0.602
rabepk
Rab9 effector protein with kelch motifs.
    
 
 0.584
tyrobp
Uncharacterized protein.
   
 0.583
LOC106932994
Protein tyrosine phosphatase non-receptor type 11b.
   
  0.555
ptpn11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
  0.555
LOC106905232
Protein tyrosine phosphatase non-receptor type 6.
   
  0.555
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.