Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC106929628Si:ch1073-335m2.2. (3155 aa)    
Predicted Functional Partners:
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.988
LOC106916248
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.988
LOC106931947
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.971
spen
Spen family transcriptional repressor.
  
  
 
0.904
wtap
WT1 associated protein.
    
 
 0.854
mettl3
Methyltransferase like 3; Belongs to the MT-A70-like family.
    
 
 0.807
LOC106919386
Nuclear receptor corepressor 1.
   
 
 0.800
ncor2
Nuclear receptor corepressor 2.
   
 
 0.800
ENSPMEP00000030787
GPS2_interact domain-containing protein.
   
 
 0.800
zc3h13
Zinc finger CCCH-type containing 13.
   
 
 0.714
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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