Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPMEP00000014116 | stx1a | ENSPMEP00000014116 | ENSPMEP00000007245 | Zgc:92912. | Syntaxin 1A (brain); Belongs to the syntaxin family. | 0.963 |
ENSPMEP00000014116 | syn1 | ENSPMEP00000014116 | ENSPMEP00000021295 | Zgc:92912. | Synapsin I. | 0.658 |
ENSPMEP00000014116 | syp | ENSPMEP00000014116 | ENSPMEP00000001729 | Zgc:92912. | Synaptophysin b. | 0.598 |
ENSPMEP00000014116 | vamp3 | ENSPMEP00000014116 | ENSPMEP00000031817 | Zgc:92912. | V-SNARE coiled-coil homology domain-containing protein. | 0.896 |
ENSPMEP00000026158 | stx1a | ENSPMEP00000026158 | ENSPMEP00000007245 | Vesicle-associated membrane protein 1. | Syntaxin 1A (brain); Belongs to the syntaxin family. | 0.963 |
ENSPMEP00000026158 | syn1 | ENSPMEP00000026158 | ENSPMEP00000021295 | Vesicle-associated membrane protein 1. | Synapsin I. | 0.658 |
ENSPMEP00000026158 | syp | ENSPMEP00000026158 | ENSPMEP00000001729 | Vesicle-associated membrane protein 1. | Synaptophysin b. | 0.598 |
ENSPMEP00000026158 | vamp2 | ENSPMEP00000026158 | ENSPMEP00000000418 | Vesicle-associated membrane protein 1. | Vesicle-associated membrane protein 2. | 0.899 |
ENSPMEP00000026158 | vamp3 | ENSPMEP00000026158 | ENSPMEP00000031817 | Vesicle-associated membrane protein 1. | V-SNARE coiled-coil homology domain-containing protein. | 0.968 |
LOC106927543 | syp | ENSPMEP00000024730 | ENSPMEP00000001729 | RAB5A, member RAS oncogene family, a. | Synaptophysin b. | 0.511 |
gne | nans | ENSPMEP00000019425 | ENSPMEP00000019536 | Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase. | N-acetylneuraminic acid synthase a. | 0.981 |
gne | syp | ENSPMEP00000019425 | ENSPMEP00000001729 | Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase. | Synaptophysin b. | 0.551 |
nagk | syp | ENSPMEP00000008577 | ENSPMEP00000001729 | N-acetylglucosamine kinase. | Synaptophysin b. | 0.507 |
nans | gne | ENSPMEP00000019536 | ENSPMEP00000019425 | N-acetylneuraminic acid synthase a. | Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase. | 0.981 |
nans | syp | ENSPMEP00000019536 | ENSPMEP00000001729 | N-acetylneuraminic acid synthase a. | Synaptophysin b. | 0.577 |
stx1a | ENSPMEP00000014116 | ENSPMEP00000007245 | ENSPMEP00000014116 | Syntaxin 1A (brain); Belongs to the syntaxin family. | Zgc:92912. | 0.963 |
stx1a | ENSPMEP00000026158 | ENSPMEP00000007245 | ENSPMEP00000026158 | Syntaxin 1A (brain); Belongs to the syntaxin family. | Vesicle-associated membrane protein 1. | 0.963 |
stx1a | syn1 | ENSPMEP00000007245 | ENSPMEP00000021295 | Syntaxin 1A (brain); Belongs to the syntaxin family. | Synapsin I. | 0.451 |
stx1a | syp | ENSPMEP00000007245 | ENSPMEP00000001729 | Syntaxin 1A (brain); Belongs to the syntaxin family. | Synaptophysin b. | 0.601 |
stx1a | vamp2 | ENSPMEP00000007245 | ENSPMEP00000000418 | Syntaxin 1A (brain); Belongs to the syntaxin family. | Vesicle-associated membrane protein 2. | 0.961 |
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