Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CXorf21Chromosome X open reading frame 21. (328 aa)    
Predicted Functional Partners:
slc15a4
Solute carrier family 15 member 4.
    
 0.995
SLC15A1
Solute carrier family 15 member 1b.
    
 0.809
LOC106926479
Solute carrier family 15 member 2.
    
 0.809
LOC106926437
Solute carrier family 15 member 1a.
    
 0.809
slc15a5
Solute carrier family 15 member 5.
    
 0.730
tmem187
Transmembrane protein 187.
      
 0.663
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
     
  0.585
LOC106915153
Protein kinase domain-containing protein.
     
  0.585
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
     
  0.521
NR0B1
Nuclear receptor subfamily 0 group B member 1.
      
 0.473
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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