STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trim13Tripartite motif containing 13. (434 aa)    
Predicted Functional Partners:
LOC106906108
Interferon regulatory factor 3.
   
 0.693
sting1
Transmembrane protein 173.
    
  0.662
LOC106907697
Interferon regulatory factor 3.
   
 0.645
irf7
Interferon regulatory factor 7.
    
 0.641
HSF1
Heat shock transcription factor 1.
   
 
 0.627
LOC106919484
FinTRIM family, member 82.
      
 0.573
LOC106919486
FinTRIM family, member 83.
      
 0.572
LOC106932298
Tripartite motif containing 25.
      
 0.536
ENSPMEP00000001506
RING-type domain-containing protein.
      
 0.536
LOC106923389
Ubiquitin-like domain-containing protein.
    
  0.484
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.