Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106904562Uncharacterized protein. (426 aa)    
Predicted Functional Partners:
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 
 0.828
depdc5
DEP domain containing 5.
    
   0.788
LOC106924331
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.777
LOC106930984
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.777
zdhhc15
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.777
LOC106921835
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.777
zdhhc20
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.777
zdhhc16
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.777
LOC106929945
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.772
mtor
Serine/threonine-protein kinase TOR.
    
 
 0.772
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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