Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001784DUF4939 domain-containing protein. (552 aa)    
Predicted Functional Partners:
ENSPMEP00000008731
Helicase ATP-binding domain-containing protein.
   
 0.687
mtrex
Mtr4 exosome RNA helicase.
   
 0.687
ENSPMEP00000004645
Uncharacterized protein.
 
 
   0.582
ENSPMEP00000016406
Uncharacterized protein.
 
 
   0.580
ebna1bp2
EBNA1 binding protein 2.
   
   0.567
tent4a
Terminal nucleotidyltransferase 4A.
   
 0.565
tent4b
Terminal nucleotidyltransferase 4B.
   
 0.565
LOC106926900
Uncharacterized protein.
   
 0.565
ENSPMEP00000003550
Uncharacterized protein.
 
 
   0.559
ENSPMEP00000015502
Uncharacterized protein.
 
 
   0.557
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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