Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc8a2Solute carrier family 8 member 2b; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (973 aa)    
Predicted Functional Partners:
LOC106923625
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
  0.650
LOC106906228
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
     
  0.650
LOC106931018
Protein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily.
     
  0.650
akap1
A kinase (PRKA) anchor protein 1b.
     
  0.499
LOC106925264
Nuclear receptor subfamily 1, group D, member 4b.
    
 
 0.454
clns1a
Chloride channel, nucleotide-sensitive, 1A.
   
  
 0.409
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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