STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCBTB1RCC1 and BTB domain containing protein 1. (554 aa)    
Predicted Functional Partners:
ranbp2
RAN binding protein 2.
   
 0.667
zfand4
Zinc finger, AN1-type domain 4.
    
 0.643
LOC106931379
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.634
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.634
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.594
nek7
NIMA-related kinase 7; Belongs to the protein kinase superfamily.
    
 0.579
idh3g
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
    
  0.561
idh3b
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
    
  0.561
dph3
Diphthamide biosynthesis 3.
    
 
 0.554
LOC106931947
Recombination signal binding protein for immunoglobulin kappa J region-like.
   
 0.553
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.