STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106915887IQ motif and Sec7 domain 2b. (1502 aa)    
Predicted Functional Partners:
LOC106923891
Cytohesin 4b.
    
 
0.623
CYTH3
Cytohesin 3.
    
 
0.540
cyth1
Cytohesin 1b.
    
 
0.540
LOC106909539
Cytohesin 2.
    
 
0.540
LOC106928257
Uncharacterized protein.
    
 
0.540
LOC106920077
Cytohesin 1a.
    
 
0.540
LOC106925840
Uncharacterized protein.
    
 
0.540
LOC106934044
Cytohesin 4a.
    
 
0.521
LOC106903847
Uncharacterized protein.
     
0.501
LOC106917421
Uncharacterized protein.
     
0.501
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.