STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106922088Uncharacterized protein. (283 aa)    
Predicted Functional Partners:
ctsh
Cathepsin H; Belongs to the peptidase C1 family.
   
 0.663
ctsz
Cathepsin Z; Belongs to the peptidase C1 family.
   
 0.622
LOC106930956
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 0.622
LOC106929094
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 0.622
cs
Citrate synthase; Belongs to the citrate synthase family.
   
   0.615
LOC106928312
Cathepsin Bb; Belongs to the peptidase C1 family.
   
 0.613
LOC106906469
Cathepsin Ba; Belongs to the peptidase C1 family.
   
 0.613
ENSPMEP00000000574
Zgc:103697.
    
   0.606
drg1
Developmentally regulated GTP binding protein 1.
    
   0.606
LOC106906791
Uncharacterized protein.
    
   0.606
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.