Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cdc42ep2Zgc:154093. (220 aa)    
Predicted Functional Partners:
ENSPMEP00000016656
CDC42 effector protein (Rho GTPase binding) 1b.
     
 0.452
LOC106918224
CDC42 effector protein (Rho GTPase binding) 4a.
     
 0.452
LOC106919478
CDC42 effector protein (Rho GTPase binding) 4b.
     
 0.452
ENSPMEP00000030829
CDC42 effector protein (Rho GTPase binding) 5.
     
 0.452
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
     
  0.443
mapkapk2
MAPK activated protein kinase 2a; Belongs to the protein kinase superfamily.
     
  0.425
LOC106923225
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
     
  0.425
MAPKAPK3
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
     
  0.425
mapkapk5
MAPK activated protein kinase 5.
     
  0.425
LOC106921983
Glucose-fructose oxidoreductase domain containing 2.
     
  0.422
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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