STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH8Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins. (799 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.827
LOC106931515
Junction plakoglobin a.
    
 0.804
LOC106921026
Uncharacterized protein.
    
 0.689
fjx1
Four-jointed box kinase 1.
   
 0.669
LOC106931162
Catenin (cadherin-associated protein), delta 1.
    
 0.652
ARVCF
ARVCF delta catenin family member b.
    
 0.652
CTNND1
Catenin delta 1.
    
 0.652
ptprg
Carbonic anhydrase XVI b.
    
 0.623
LOC106918628
Protein tyrosine phosphatase receptor type Sa.
   
 0.621
cep85
Centrosomal protein 85.
      
 0.601
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.