Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106905355Amino acid transporter. (497 aa)    
Predicted Functional Partners:
blmh
Bleomycin hydrolase; Belongs to the peptidase C1 family.
     
 0.552
b3galnt2
Hexosyltransferase.
      
 0.533
med19
Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
      
 0.531
LOC106905749
Solute carrier family 7 member 5.
   
 
 0.524
slc3a1
Solute carrier family 3 member 1.
  
 
 0.511
dbt
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.511
slc7a7
Solute carrier family 7 member 7.
   
 
 0.452
LOC106907556
Uncharacterized protein.
    
 0.451
slc13a5
Solute carrier family 13 member 5a.
    
 0.451
LOC106907017
Solute carrier family 13 member 2.
    
 0.451
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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