STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glceGlucuronic acid epimerase b. (591 aa)    
Predicted Functional Partners:
LOC106908049
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a.
   
 0.981
ndst1
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a.
   
 0.963
LOC106928607
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3.
   
 0.963
LOC106927638
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.655
LOC106907483
Uncharacterized protein.
   
 
 0.607
hs2st1
Heparan sulfate 2-O-sulfotransferase 1a.
   
 
 0.607
LOC106933018
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.581
extl3
Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
      
 0.546
LOC106920283
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
    
 
 0.544
slc35b3
Solute carrier family 35 member B3.
      
 0.539
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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