Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001901Reverse transcriptase domain-containing protein. (393 aa)    
Predicted Functional Partners:
mrpl16
Mitochondrial ribosomal protein L16.
   
 
 0.631
mrps14
Mitochondrial ribosomal protein S14.
    
 
 0.606
mrps12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.585
mrpl2
Mitochondrial ribosomal protein L2.
    
 
 0.582
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
    
 
 0.538
ENSPMEP00000032297
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.532
mrpl43
Mitochondrial ribosomal protein L43.
    
   0.515
mrpl33
Mitochondrial ribosomal protein L33.
    
   0.515
LOC106927361
Mitochondrial ribosomal protein L23.
    
   0.515
mrpl46
Mitochondrial ribosomal protein L46.
    
   0.515
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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