Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000001923Ig-like domain-containing protein. (120 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
   0.476
ntng1
Vav 3 guanine nucleotide exchange factor b.
    
 0.444
LOC106929859
Netrin g1a.
    
 0.444
ENSPMEP00000004214
NGF domain-containing protein; Belongs to the NGF-beta family.
    
   0.430
mymk
Myomaker, myoblast fusion factor.
    
   0.430
ENSPMEP00000030515
Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.
    
   0.430
rad50
RAD50 homolog, double strand break repair protein.
    
 0.427
ENSPMEP00000007008
Protein kinase domain-containing protein.
    
  0.423
ENSPMEP00000025527
Ig-like domain-containing protein.
    
  0.423
ENSPMEP00000030584
Uncharacterized protein.
    
  0.423
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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