Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SNX7Sorting nexin 7. (358 aa)    
Predicted Functional Partners:
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.890
SNX4
Sorting nexin 4.
  
 
 0.883
bloc1s2
Biogenesis of lysosomal organelles complex-1, subunit 2.
    
 
 0.858
ENSPMEP00000006494
PX domain-containing protein.
   
 
 0.854
LOC106911220
PX domain-containing protein.
   
 
 0.854
snx6
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.777
snx5
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.777
vamp2
Vesicle-associated membrane protein 2.
    
 0.746
ENSPMEP00000014116
Zgc:92912.
    
 0.746
ENSPMEP00000026158
Vesicle-associated membrane protein 1.
    
 0.746
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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