Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC106905356Non-specific serine/threonine protein kinase. (507 aa)    
Predicted Functional Partners:
pak1
Non-specific serine/threonine protein kinase.
  
 
0.994
nck1
Cytoplasmic protein.
    
 0.989
nck2
Cytoplasmic protein.
    
 0.989
LOC106933042
Cell division cycle 42.
   
 0.986
raf1
Raf-1 proto-oncogene, serine/threonine kinase a.
    
 
0.973
arhgef6
Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6.
   
 0.964
arhgef7
Rho guanine nucleotide exchange factor (GEF) 7a.
   
 0.964
LOC106907186
Rho guanine nucleotide exchange factor (GEF) 7b.
   
 0.964
CDC42
Cell division cycle 42.
   
 0.963
LOC106921034
Mitogen-activated protein kinase kinase kinase 22.
  
 
0.956
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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