Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nufip1C2H2-type domain-containing protein. (482 aa)    
Predicted Functional Partners:
znhit6
Zinc finger HIT-type containing 6.
   
 
 0.771
znhit3
Zinc finger, HIT-type containing 3.
    
 
 0.766
nxf1
Zgc:153681.
    
 
 0.738
eif5
Eukaryotic translation initiation factor 5.
   
  
 0.703
nvl
Nuclear VCP like.
    
 
 0.701
cyfip1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
      
 0.672
nol10
Nucleolar protein 10.
   
  
 0.650
rpap3
RNA polymerase II associated protein 3.
   
 0.633
znhit2
Zinc finger, HIT-type containing 2.
    
 
 0.609
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.570
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.