Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106929598Tantalus domain-containing protein. (1160 aa)    
Predicted Functional Partners:
LOC106919980
Protein phosphatase 2, regulatory subunit A, beta b.
    
   0.878
LOC106904529
Serine/threonine-protein phosphatase.
    
   0.770
LOC106925647
Serine/threonine-protein phosphatase.
    
   0.770
ppp2ca
Serine/threonine-protein phosphatase.
    
   0.770
ENSPMEP00000023606
Uncharacterized protein.
  
 
  0.575
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.573
sfi1
SFI1 centrin binding protein.
      
 0.561
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.540
LOC106911518
Uncharacterized protein.
  
 
 
 0.519
hells
Helicase, lymphoid specific.
    
 0.514
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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