Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hcfc2Host cell factor C2. (736 aa)    
Predicted Functional Partners:
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
   
 0.962
rbbp5
Retinoblastoma binding protein 5.
   
 0.936
bap1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.935
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.934
ENSPMEP00000016817
Uncharacterized protein.
  
  
 
0.901
hcfc1
Host cell factor C1a.
     
 
0.900
setd1a
SET domain containing 1A, histone lysine methyltransferase.
   
 0.893
setd1b
SET domain containing 1B, histone lysine methyltransferase a.
   
 0.893
men1
Multiple endocrine neoplasia I.
    
 0.888
kansl3
KAT8 regulatory NSL complex subunit 3.
   
 0.879
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.