Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
vwfVon Willebrand factor. (2378 aa)    
Predicted Functional Partners:
adamts13
ADAM metallopeptidase with thrombospondin type 1 motif, 13.
    
 0.877
nup214
Uncharacterized protein.
    
 0.786
gp1bb
Glycoprotein Ib platelet subunit beta.
    
 0.784
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.777
LOC106930493
Coagulation factor VIII, procoagulant component; Belongs to the multicopper oxidase family.
    
 0.767
LOC106917637
Coagulation factor V; Belongs to the multicopper oxidase family.
    
 0.767
bysl
Bystin-like.
    
 
 0.747
nup98
Nucleoporin 98.
    
 0.732
LOC106915805
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.728
nup43
Nucleoporin 43.
    
 0.708
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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