close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000002011MyTH4 domain-containing protein. (164 aa)    
Predicted Functional Partners:
ush1c
Usher syndrome 1C.
   
 0.713
ENSPMEP00000000593
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.674
LOC106920069
Usher syndrome 1Ga (autosomal recessive).
   
 0.674
ush1g
Usher syndrome 1Gb (autosomal recessive).
   
 0.674
LOC106924391
Uncharacterized protein.
    
 0.612
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
    
  0.612
LOC106914399
Myosin, light chain 9a, regulatory.
    
 0.612
LOC106923676
Uncharacterized protein.
    
 0.612
LOC106920830
Uncharacterized protein.
    
 0.612
ENSPMEP00000011821
Uncharacterized protein.
    
 0.612
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.