STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
piwil1Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family. (855 aa)    
Predicted Functional Partners:
LOC106921721
Tudor domain containing 6.
   
 0.955
tdrd1
Tudor domain containing 1.
   
 0.954
ENSPMEP00000008387
Uncharacterized protein.
   
 0.931
tdrkh
Tudor and KH domain containing.
   
 0.897
tdrd9
Tudor domain containing 9.
   
 0.873
tdrd5
Uncharacterized protein.
   
 0.863
rnf17
Ring finger protein 17.
   
 0.842
snd1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
   
 0.793
LOC106933064
Tudor domain containing 7 b.
   
 0.791
LOC106904937
Tudor domain containing 7 a.
   
 0.791
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.