Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cnga1Cyclic nucleotide gated channel subunit alpha 1b. (541 aa)    
Predicted Functional Partners:
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.944
calml4
Calmodulin-like 4a.
    
 0.927
LOC106927383
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
  
0.869
LOC106927384
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
  
0.868
ENSPMEP00000008665
Si:dkey-44k1.5.
  
0.866
ENSPMEP00000010831
Cyclic nucleotide gated channel beta 1a.
  
0.866
guca1b
Guanylate cyclase activator 1B.
   
 0.639
guca1a
Guanylate cyclase activator 1A.
   
 0.592
pde6c
Phosphodiesterase.
   
 0.564
LOC106926251
Cyclic nucleotide gated channel subunit alpha 4.
  
  
 
0.552
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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