STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106906100Uncharacterized protein. (207 aa)    
Predicted Functional Partners:
LOC106933771
SIN3 transcription regulator family member B.
    
 0.667
LOC106910568
SIN3 transcription regulator family member Aa.
    
 0.667
LOC106923024
SIN3 transcription regulator family member Ab.
    
 0.667
optn
Optineurin.
   
 0.645
ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.645
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.634
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.624
LOC106915153
Protein kinase domain-containing protein.
    
 0.624
tbk1
TANK-binding kinase 1.
    
 0.624
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.624
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.