Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000002172Uncharacterized protein. (88 aa)    
Predicted Functional Partners:
LOC106911519
Uncharacterized protein.
   
 0.891
ppp3r1
Uncharacterized protein.
   
 0.891
LOC106923441
RHD domain-containing protein.
    
 0.890
LOC106906278
Calcineurin-like EF-hand protein 2.
    
 0.798
rcan3
Regulator of calcineurin 3.
    
 
 0.764
LOC106931852
Regulator of calcineurin 1a.
    
 
 0.764
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.729
ENSPMEP00000025701
EF-hand domain-containing protein; Belongs to the calmodulin family.
    
 0.729
LOC106922942
Calmodulin.
    
 0.729
calm3
Calmodulin 3.
    
 0.729
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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