STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000002172Uncharacterized protein. (88 aa)    
Predicted Functional Partners:
wdr92
WD repeat domain 92.
    
 0.900
LOC106911519
Uncharacterized protein.
   
 0.881
ppp3r1
Uncharacterized protein.
   
 0.881
LOC106923441
RHD domain-containing protein.
    
 0.879
anapc1
Anaphase promoting complex subunit 1.
    
 0.858
igbp1
Immunoglobulin (CD79A) binding protein 1.
    
 0.812
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
   
  0.802
nfatc3
Nuclear factor of activated T cells 3a.
    
 0.782
LOC106929020
RHD domain-containing protein.
    
 0.781
chp1
Calcineurin-like EF-hand protein 1.
   
 0.778
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.