STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000002183Macro domain-containing protein. (221 aa)    
Predicted Functional Partners:
ifih1
Interferon induced with helicase C domain 1.
   
 
 0.786
LOC106911481
RING-type domain-containing protein.
   
 0.763
ENSPMEP00000017440
RING-type domain-containing protein.
   
 0.763
LOC106914968
RING-type domain-containing protein.
   
 0.763
ENSPMEP00000002167
Poly [ADP-ribose] polymerase.
 
      0.741
LOC106914966
Zgc:66440.
   
 0.736
parp9
Uncharacterized protein.
  
 
0.567
parp3
Poly [ADP-ribose] polymerase.
    
 
 0.550
aifm1
Apoptosis inducing factor mitochondrion associated 1.
  
 0.548
LOC106921057
Histone deacetylase 12.
  
 0.547
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.