STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPMEP00000002193Uncharacterized protein. (407 aa)    
Predicted Functional Partners:
cd79a
CD79a molecule, immunoglobulin-associated alpha.
   
 0.910
LOC106921395
Ig-like domain-containing protein.
    
 0.906
LOC106931987
Polymeric immunoglobulin receptor.
    
 0.660
tyrobp
Uncharacterized protein.
   
 0.648
ENSPMEP00000023739
Ig-like domain-containing protein.
    
 0.624
ENSPMEP00000026409
Uncharacterized protein.
    
  0.612
plg
Plasminogen; Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated b [...]
    
  0.612
plcg2
Phosphoinositide phospholipase C.
    
  0.581
ENSPMEP00000009177
Uncharacterized protein.
    
 0.571
ENSPMEP00000016624
Uncharacterized protein.
    
 0.571
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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