STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106919087Sodium channel, voltage-gated, type IV, beta b. (227 aa)    
Predicted Functional Partners:
LOC106922467
Sodium channel, voltage-gated, type IV, beta a.
  
  
 
0.959
LOC106927629
Sodium channel, voltage-gated, type I, beta b.
    
 0.909
camk2b
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2.
   
 
  0.899
LOC106904815
Calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2.
   
 
  0.899
ENSPMEP00000021723
CaMKII_AD domain-containing protein.
   
 
  0.868
ENSPMEP00000026151
Protein kinase domain-containing protein.
   
 
  0.868
ENSPMEP00000000825
Uncharacterized protein.
    
 0.864
LOC106916028
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
    
 0.864
ENSPMEP00000021443
Uncharacterized protein.
    
 0.864
ENSPMEP00000021450
Ion_trans domain-containing protein.
    
 0.864
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.