STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106908311Microtubule-associated protein 1Sb. (1157 aa)    
Predicted Functional Partners:
mapre2
Microtubule-associated protein, RP/EB family, member 2.
    
 
 0.583
LOC106928692
Vacuole membrane protein 1.
      
 0.564
VMP1
Vacuole membrane protein 1.
      
 0.564
dlg5
Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family.
    
 
 0.554
fmr1
Fragile X mental retardation 1.
    
 
 0.547
fxr1
Fragile X mental retardation, autosomal homolog 1.
    
 
 0.507
LOC106920520
Fragile X mental retardation, autosomal homolog 2.
    
 
 0.507
becn1
Beclin 1, autophagy related.
      
 0.499
LOC106915352
Centrosomal protein 131.
   
 
 0.452
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.437
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.