STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spata2Spermatogenesis associated 2. (566 aa)    
Predicted Functional Partners:
LOC106925213
Uncharacterized protein.
     
 0.962
cyld
Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.
     
 0.927
LOC106906264
Cylindromatosis (turban tumor syndrome), b.
     
 0.927
LOC106919113
Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.
     
 0.908
LOC106903560
Nuclear factor of activated T cells 4.
     
 0.654
LOC106915588
Synemin, intermediate filament protein; Belongs to the intermediate filament family.
  
  
  0.530
ENSPMEP00000000420
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
  
     0.455
znf217
Zinc finger protein 217.
  
     0.439
LOC106909446
Zinc fingers and homeoboxes 3.
  
     0.417
Your Current Organism:
Poecilia mexicana
NCBI taxonomy Id: 48701
Other names: shortfin molly
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.